BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019E08LP1|AL427497
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1718 1787 0.0
3x_Contig105 762 0.0
>3x_Contig1718
Length = 19496
Score = 1787 bits (900), Expect = 0.0
Identities = 912/916 (99%), Gaps = 1/916 (0%)
Strand = Plus / Minus
Query: 3 cagtgcttggacgtccaaatacaccatttatagaccgtgtgatggcagaactccaagaac 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7766 cagtgcttggacgtccaaatacaccatttatagaccgtgtgatggcagaactccaagaac 7707
Query: 63 caaacgttttgattccagggtacgagcatggagaagtggaaaagctattggtatccgttg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7706 caaacgttttgattccagggtacgagcatggagaagtggaaaagctattggtatccgttg 7647
Query: 123 aagagaccaagaagaagcaagcgagtttgacagggttagattccttgcttgaggaacagt 182
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7646 aagagaccaagaagaagcaagctagtttgacagggttagattccttgcttgaggaacagt 7587
Query: 183 ctatcaaaaatctaaggaacaagcatgaggccgtgcttcgtattatcaatatgaagaacg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7586 ctatcaaaaatctaaggaacaagcatgaggccgtgcttcgtattatcaatatgaagaacg 7527
Query: 243 ctagtaacgcagatgccttgaagatggctgtsagattggcaagagaagaattccaaagat 302
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7526 ctagtaacgcagatgccttgaagatggctgtcagattggcaagagaagaattccaaagat 7467
Query: 303 tccccgggg-atacaggttcgagcgaagtacaggctgctgtcatgaccgtcagaattcat 361
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7466 tccccgggggatacaggttcgagcgaagtacaggctgctgtcatgaccgtcagaattcat 7407
Query: 362 aacttggctaaacatgtaaaggagaataagaaagattttaagaacattagagcgttgaga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7406 aacttggctaaacatgtaaaggagaataagaaagattttaagaacattagagcgttgaga 7347
Query: 422 attttggtacaacaaagacaaagtatcttgagatatttgaagaaagatcagcctgaaaga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7346 attttggtacaacaaagacaaagtatcttgagatatttgaagaaagatcagcctgaaaga 7287
Query: 482 tatttctggaccattcaaaagttgggtctaacggataatgcagctatgtctgaattcaat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7286 tatttctggaccattcaaaagttgggtctaacggataatgcagctatgtctgaattcaat 7227
Query: 542 atggatagacgttatatgcaagattataaattcttcggtgatgttattttgattaaggat 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7226 atggatagacgttatatgcaagattataaattcttcggtgatgttattttgattaaggat 7167
Query: 602 tcgaataaggttgccgatgctaagcgtaaggctgctcgtaaggaaaaaatgttcagttcc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7166 tcgaataaggttgccgatgctaagcgtaaggctgctcgtaaggaaaaaatgttcagttcc 7107
Query: 662 gagcaatagattttaaaagaatactataggaattgaaaatgccgaaaacgaaaacgatag 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7106 gagcaatagattttaaaagaatactataggaattgaaaatgccgaaaacgaaaacgatag 7047
Query: 722 atatatttccatacgcttcaaaatgatcttcgtttattatttgtagcagaatctgctact 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7046 atatatttccatacgcttcaaaatgatcttcgtttattatttgtagcagaatctgctact 6987
Query: 782 cttgtatatatatacatacttcacatttcataattatgaaaacaaagtaaggaataacgc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6986 cttgtatatatatacatacttcacatttcataattatgaaaacaaagtaaggaataacgc 6927
Query: 842 taatgcagtcgtatcaaattaaaaaaagttgtctatataawtttatgcacaatctttggt 901
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 6926 taatgcagtcgtatcaaattaaaaaaagttgtctatataaatttatgcacaatctttggt 6867
Query: 902 ttatagctgatcacgg 917
||||||||||||||||
Sbjct: 6866 ttatagctgatcacgg 6851
>3x_Contig105
Length = 870
Score = 762 bits (384), Expect = 0.0
Identities = 401/406 (98%), Gaps = 1/406 (0%)
Strand = Plus / Plus
Query: 511 aacggataatgcagctatgtctgaattcaatatggatagacgttatatgcaagattataa 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aacggataatgcagctatgtctgaattcaatatggatagacgttatatgcaagattataa 67
Query: 571 attcttcggtgatgttattttgattaag-gattcgaataaggttgccgatgctaagcgta 629
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 68 attcttcggtgatgttattttgattaagcgattcgaataaggttgccgatgctaagcgta 127
Query: 630 aggctgctcgtaaggaaaaaatgttcagttccgagcaatagattttaaaagaatactata 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aggctgctcgtaaggaaaaaatgttcagttccgagcaatagattttaaaagaatactata 187
Query: 690 ggaattgaaaatgccgaaaacgaaaacgatagatatatttccatacgcttcaaaatgatc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggaattgaaaatgccgaaaacgaaaacgatagatatatttccatacgcttcaaaatgatc 247
Query: 750 ttcgtttattatttgtagcagaatctgctactcttgtatatatatacatacttcacattt 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttcgtttattatttgtagcagaatctgctactcttgtatatatatacatacttcacattt 307
Query: 810 cataattatgaaaacaaagtaaggaataacgctaatgcagtcgtatcaaattaaaaaaag 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cataattatgaaaacaaagtaaggaataacgctaatgcagtcgtatcaaattaaaaaaag 367
Query: 870 ttgtctatataawtttatgcacaatctttggtttatagctgatcac 915
|||||||||||| ||||||||||||||||| |||||| || |||||
Sbjct: 368 ttgtctatataaatttatgcacaatctttgctttatacctcatcac 413
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8268
Number of Sequences: 1807
Number of extensions: 8268
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 2
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)